Hetdex and Third Party Software Index

Tcs code and Python scripting support

Tcs Control Systems (HTML) (PDF) -- Tcs Control Systems (doxygen docs)
Tcs API Handlers (text) -- Handler documentation
Tcs Event Key List (text) Event keys
Tcs Epics Relay Event Key List (text) Epics Relay event keys
tcs_lib -- Python event interface to Tcs from MPE
TcsUtils (PDF) -- Python utilities by Jim Fowler
Sams Log Analysis System (HTML) (PDF) -- Sams Log Analysis

C++ and C libraries

ltl -- little template library in C++
Qt -- C++ graphics package
Zero MQ -- Advanced socket library in C++

SCS 2 packages

SCS2 Software and Libraries

smocod code documentation is lacking an overview/intro, but the code is documented approximately by module, divided into public and implementation for each.

Python packages

Astropy -- Python astronomy package
Matplotlib -- Python matplotlib graphing package
Mock -- Python mock testing package
Nose -- Python nose testing package
Numpy -- Python scientific math package
Scipy -- Python scientific package
Pil -- Python Imaging Library
pyDS9 -- Python interface to DS9 viewer
PyQt 4.8.7 -- Python Qt wrapper Library
pyZMQ -- Python ZeroMQ wrapper Library
Sphinx -- Python documentation package
Pip -- Python installer package
Genshi -- Genshi Template Library
Bacpypes -- Python Bacnet Library
Libmodbus -- Modbus Communications Library

Virus packages

cure -- cure analysis package (location /home/mcs/astronomer/hetdex_code)
pyhetdex -- HetDex python utilities (location /opt/het/hetdex/src/Virus/pyhetdex)-->
vhc -- Virus Health Check package (location /home/mcs/astronomer/hetdex_code)
vdat -- Virus Data Analysis Tool (location /opt/het/hetdex/src/Virus/vdat)
OCD -- Observation Condition Decision tool (location /opt/het/hetdex/src/Virus/ocd)
OCD Operations at Home (part of the HetDex Wiki, password required)
Hetdex Shuffle --Shuffle (location /opt/het/hetdex/src/Virus/ocd)

Documentation

Accessing this software

If you are using bash or a Bourne shell variant add the following to your .bashrc


  #
  # .bashrc setup for HetDex
  #

  # location of third-party and hetdex software executables
  #  (this is required to operate the software)
  #
  export HET_DEPLOY_DIR=/opt/het/hetdex

  # modify environment variables to gain access to the system
  #  (this is required to operate the software)
  #
  export LIBRARY_PATH=$HET_DELOY_DIR/lib:$HETDEX_DIR/epics/lib/linux-x86_64
  export PATH=$HET_DEPLOY_DIR/bin:$PATH

  #
  # make python 2.7 the default
  #
  alias python="$HET_DEPLOY_DIR/Python-2.7/bin/python2.7"
  export PYTHONPATH=$HET_DEPLOY_DIR/lib/python2.7/site-packages:$HET_DEPLOY_DIR/lib64/python2.7/site-packages:$PYTHONPATH

  export LD_LIBRARY_PATH=$HET_DEPLOY_DIR/lib:$HET_DEPLOY_DIR/epics/lib/linux-x86_64:$HET_DEPLOY_DIR/plugins/designer:$LD_LIBRARY_PATH

  #
  # To access virus software add the following
  #
  export VHC_CONFIG=/opt/het/hetdex/etc/Virus/vhc_config/vhc_settings.cfg
  export CUREBIN=/opt/het/hetdex/bin

If you use csh or tcsh, then include the following in your .cshrc file.

  #
  # .cshrc set up for HetDex
  #

  # location of third-party and hetdex software executables
  #  (this is required to operate the software)
  #
  setenv HET_DEPLOY_DIR /opt/het/hetdex

  # for third-party software locations
  #  (this is required to operate the software)
  #
  setenv LIBRARY_PATH $HET_DEPLOY_DIR/lib:$HET_DEPLOY_DIR/epics/lib/linux-x86_64
  setenv PATH $HET_DEPLOY_DIR/bin:$PATH

  setenv LD_LIBRARY_PATH $HET_DEPLOY_DIR/lib:$HET_DEPLOY_DIR/epics/lib/linux-x86_64:$HET_DEPLOY_DIR/plugins/designer

  #
  # Make python 2.7 the default
  #
  alias python /opt/het/hetdex/Python-2.7/bin/python
  setenv PYTHONPATH $HET_DEPLOY_DIR/lib/python2.7/site-packages:$HET_DEPLOY_DIR/lib64/python2.7/site-packages'

  #
  # To access virus software add the following
  #
  setenv VHC_CONFIG /opt/het/hetdex/etc/Virus/vhc_config/vhc_settings.cfg
  setenv CUREBIN /opt/het/hetdex/bin

Created: 18-Feb-2015
Last updated: 27-Jul-2015